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Optical control of neural population activity and growth
Lecture
Tuesday, June 9, 2009
Hour: 12:30
Location:
Jacob Ziskind Building
Optical control of neural population activity and growth
Dr. Shy Shoham
Faculty of Biomedical Engineering
Technion – I.I.T. Haifa
Retinal neuroprosthetics can potentially be used to address some of the major degenerative disorders that cause blindness, including Retinitis Pigmentosa and Macular Degeneration, by bypassing the degenerated photoreceptor layer, and interfacing directly the more viable Retinal Ganglion Cells (RGCs). I will describe the development of new optical and computational tools aimed at allowing controlled experimental emulation of activity patterns in a large population of retinal ganglion cells and their correlation structure. First, we introduce new optical systems allowing control of increasingly complex spatiotemporal activity patterns in neural populations, focusing on holographic photo-stimulation which has several fundamental advantages in this application. Next, we introduce a general new computational strategy based on correlation distortions, for controlling and analyzing the pair-wise correlation structure (defined in terms of auto- and cross-correlation functions) in multiple synthetic spike trains. This approach can be used to generate stationary or non-stationary network activity patterns with predictable spatio-temporal correlations.
In a final part of the talk I will describe a new approach for exact, flexible control of neurite outgrowth in three-dimensional neural structures, and its possible applications.
Omega-3 fatty acids are essential for neuronal migration and dopaminergic wiring in the developing brain
Lecture
Wednesday, June 3, 2009
Hour: 12:00
Location:
Nella and Leon Benoziyo Building for Brain Research
Omega-3 fatty acids are essential for neuronal migration and dopaminergic wiring in the developing brain
Prof. Ephraim Yavin
Dept of Neurobiology, WIS
Diminished levels of docosahexaenoic acid (DHA, 22:6n-3), the major polyunsaturated fatty acid (FA) synthesized from alpha linolenic acid (ALA, 18:3n-3), have been implicated in changes in neurotransmitter production, ion channels disruption and impairments of a variety of cognitive, behavioural and motor functions in the developing and the adult mammal. We studied neuronal migration in the cortex and hippocampus of newborn and postnatal rats after ALA-deficiency, beginning on the 2nd day after conception and continuing for three weeks after birth. A marked decrease in the migration of bromodeoxyuridine(+)/NeuN(+)/Neurofilament(+) and glia fibrilary acidic protein(-) neuronal cells to the dense cortical plate was accompanied by a corresponding abundance of non-migrating cells in several regions such as cortical layers IV-VI, corpus callosum and the sub-ventricular zone of ALA-deficient newborn. Similarly, a delayed migration of cells to CA1 and dentate gyrus areas was noticed while most cells were retained in the subicular area adjacent to the hippocampus. The delay in migration was transient most likely due to a temporary reelin disorganization.
In addition to these changes a drastic reduction in tyrosine hydroxylase (TH) and vesicular monoamine transporter-2 (VMAT-2) levels, both of which are prerequisites for appropriate synthesis and transport of DA were noticed by RNA subtractive hybridization and proteomic techniques. Concomitantly, a large increase in DA receptors DAR1 and DAR2 were noticed. The transient impairment induced by ALA deprivation may compromise the organization of neuronal assemblies and result in aberrant neuronal connectivity (lateral connections) to enhance the risk of neurodevelopmental disorders including cerebral palsy.
The Neural Dynamics of Perception
Lecture
Tuesday, June 2, 2009
Hour: 15:00
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
The Neural Dynamics of Perception
Prof. Donald Katz
Dept of Psychology and Neuroscience
Brandeis University
Much of the research done in sensory neuroscience is founded on the assumption that "sensory" function can be adequately characterized without knowledge of response dynamics, trial-to-trial variability, between-neuron interactions, or stimulus-response relationships. My lab's research demonstrates that single-neuron taste responses in gustatory cortex (GC) in fact contain dynamics that reflect tight perception-action coupling: across 1.5 sec, these responses progress from first "coding" the presence of taste on the tongue, then the identity of that taste, and finally the taste's palatability. In this talk, I will describe the tests that we have done to relate these response dynamics to changes (attentional, motivational, and learning-related) at longer time-scales, and our evidence that they reflect coherent, attractor-like processes emerging from interactions among local and distributed networks of neurons.
Perception and Brain Plasticity in Humans: New Insights from Phase-locking Fourier Approaches to fMRI
Lecture
Tuesday, May 26, 2009
Hour: 12:30
Location:
Jacob Ziskind Building
Perception and Brain Plasticity in Humans: New Insights from Phase-locking Fourier Approaches to fMRI
Dr. Amir Amedi
Hadassah Medical School
Hebrew University Jerusalem
An integrative approach towards understanding the neural basis of congenital prosopagnosia
Lecture
Tuesday, May 19, 2009
Hour: 12:30
Location:
Jacob Ziskind Building
An integrative approach towards understanding the neural basis of congenital prosopagnosia
Dr. Galia Avidan
Dept of Psychology and Zlotowski Center for Neuroscience
Ben Gurion University of the Negev
Congenital prosopagnosia (CP) refers to the deficit in face processing that is apparently life-long in duration, arises in the absence of brain damage of any form and occurs in individuals with intact sensory and intellectual function. As such, CP provides a unique model in which to explore the psychological and neural bases of normal face processing. Despite the growing interest in CP, the neural mechanism giving rise to this disorder is still unclear. We addressed this issue by adopting an integrative approach in which both functional and structural imaging techniques were combined. Specifically, using fMRI, we have documented normal face selective activation in face -related regions in occipito-temporal cortex but in contrast, revealed abnormal activation in these individuals in frontal regions, suggesting that information propagation between frontal and occipito-temporal regions is disrupted in this disorder. Consistently with this account, diffusion tensor imaging (DTI) measures revealed that the two major posterior-anterior tracts (inferior longitudinal fasciculus, inferior fronto-occipital fasciculus) through the fusiform face area (FFA) had significantly fewer fibers and lower fractional anisotropy (FA) values in CP. Finally, along the same line, structural imaging data revealed a significant reduction in volume of the anterior fusiform gyrus in the CP group, but normal volume at the location of the functionally defined FFA. Thus, taken together, these findings provide, for the first time, a comprehensive account for the neural deficits underlying congenital prosopagnosia and shed light on the underlying distributed circuit mediating normal face processing.
Behavioral and neurophysiological correlates of GABA modulation in the basal ganglia
Lecture
Tuesday, May 5, 2009
Hour: 12:30
Location:
Jacob Ziskind Building
Behavioral and neurophysiological correlates of GABA modulation in the basal ganglia
Dr. Izhar Bar-Gad
Gonda Brain Research Center
Bar Ilan University
The cortico-basal ganglia pathway is involved in normal motor control and implicated in multiple movement disorders. We used focal microinjections of the GABA-A antagonist bicuculline to the sensorimotor putamen of behaving primates to induce stereotyped tics similar to those observed in human Tourette syndrome. The tics were accompanied by synchronized phasic changes in the local field potential and single cell activity of neurons throughout the cortico-basal ganglia loop. We also used focal injection of bicuculline to different functional domains of the globus pallidus external segment (GPe) to induce a variety of hyper-behavioral symptoms. These, symptoms varied between dyskinesia, stereotypy and attention deficit depending on injection site within the motor, limbic and associative domains respectively. The injections led to distributed uncorrelated changes in firing pattern throughout the cortico-basal ganglia loop. The neurophysiological findings and their implication on models of information processing in the basal ganglia will be discussed in the lecture.
Odotopic maps, odor coding, rats, mice, and behavior
Lecture
Monday, May 4, 2009
Hour: 12:30
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Odotopic maps, odor coding, rats, mice, and behavior
Prof. Burton Slotnick
Dept of Psychology
American University
What is the neural code for odor quality perception? Perhaps the most widely accepted view is spatial: that different odors are represented at the level of the olfactory bulb by bulbar patterns of activation, a so-called odotopic combinatorial coding for the receptive fields of olfactory sensory neurons. The primary evidence for this view comes from variety of imaging studies demonstrating orderly relationships between chemical structure of odorants and sites of activation across the olfactory bulb. However, behavioral studies with rodents fail to support predictions based on anatomy but open new avenues for research on this still elusive sensory modality.
Interactions between environmental changes and brain plasticity in birds
Lecture
Monday, April 27, 2009
Hour: 12:30
Location:
Nella and Leon Benoziyo Building for Brain Research
Interactions between environmental changes and brain plasticity in birds
Prof. Anat Barnea
Dept of Natural and Life Sciences
The Open University of Israel
Neurogenesis (birth of new neurons) occurs in many vertebrates, including humans. Most of the new neurons die before reaching destination. Those which survive migrate to various brain regions, replace older ones and connect to existing circuits. Evidence suggests that this replacement is related to acquisition of new information. Therefore, neuronal replacement is seen as a form of brain plasticity that enables organisms to adjust to environmental changes. However, direct evidence of a causal link between replacement and learning remains elusive.
I will review a few of our studies which tried to uncover conditions that influence new neuronal recruitment and survival, and how these phenomena relate to the life of birds. We hypothesize that an increase in new neuron recruitment is associated with expected or actual increase in memory load, particularly in brain regions that process and perhaps store this new information. Moreover, since new neuronal recruitment is part of a turnover process, we assume that the same conditions that favor the survival of some neurons induce the death of others. I will offer a frame and rational for comparing neuronal replacement in the adult avian brain, and try to uncover the pressures, rules, and mechanisms that govern its constant rejuvenation. I will discuss a variety of behaviors and environmental conditions (food-hoarding, social change, parent-offspring recognition, migration) and their effect on new neuronal recruitment in relevant brain regions. I will describe various approaches and techniques which we used in those studies (behavioral, anatomical, cellular and hormonal), and will emphasize the significance of studying behavior and brain function under natural or naturalistic conditions.
Neural decoding and optimal filtering: on a reverse engineering view of neural information processing
Lecture
Monday, April 20, 2009
Hour: 12:00
Location:
Nella and Leon Benoziyo Building for Brain Research
Neural decoding and optimal filtering: on a reverse engineering view of neural information processing
Prof. Ron Meir
Faculty of Electrical Engineering
Technion, Haifa
The representation of value in the human brain
Lecture
Tuesday, April 7, 2009
Hour: 12:30
Location:
Jacob Ziskind Building
The representation of value in the human brain
Prof. Ifat Levy
Yale University
The neural representation of value is a matter of great debate. In particular, it is not clear whether multiple valuation systems exist, each representing value under different conditions, or whether a single system that uses a “common currency” for the representation of value under many different conditions can be identified.
I will present two studies in which we combined experimental methods from behavioral economics with functional MRI to study the representation of value in the human brain. The first study compared choices under two terms of uncertainty: risk, when probabilities of different outcomes are known, and ambiguity, when such probabilities are not known. Our results show that although subjects exhibit markedly different choice behaviors under these two conditions, a single system, consisting of the striatum and the medial prefrontal cortex (MPFC) encodes choice values in both cases. In the second study we used MPFC activation elicited by passive viewing of goods in the scanner to predict subsequent choices between these goods made outside of the scanner. Our predictions were significantly above chance, suggesting that the same valuation system is engaged whether or not choice is required. Based on these results together with previous studies we suggest that the striatum and the MPFC are the final common pathway for valuation – other areas may be differentially involved in encoding value under different conditions, but all of these areas should transfer their output to the final system to guide choice behavior.
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How circadian clocks keep time: insights from Drosophila
Lecture
Tuesday, March 17, 2009
Hour: 12:30
Location:
Jacob Ziskind Building
How circadian clocks keep time: insights from Drosophila
Dr. Sebastian Kadener
Dept of Biological Chemistry
The Hebrew University of Jerusalem
Circadian rhythms in locomotor activity are an example of a well-characterized behavior for which the molecular and neurobiological bases are not yet completely understood. These rhythms are self-sustained 24 hours rhythms that underlie most physiological and behavioral processes. The central circadian clock, which is situated in the brain, is responsible for daily rhythms in locomotor activity that persist even after weeks in constant darkness (DD). Peripheral clocks are spread trough the fly body and regulate a plethora of physiological functions that include: olfaction, detoxification and immunity. All these clocks keep time trough complex transcriptional-translational feedback loops that include the proteins CLK, CYC, PER and TIM. My research focuses on the study of the molecular basis of the circadian clock. In particular, I am interested in the contribution of the different molecular interactions and processes to the generation of robust 24hs rhythms. In this context, I have recently demonstrated that transcriptional speed of the clock gene PER is a determinant of the circadian period and that translational regulation by miRNAs is part of the central circadian clock.
Complex Translational Control in the Gustatory Cortex Determines the Stability of a Taste Memory
Lecture
Thursday, March 12, 2009
Hour: 12:00
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Complex Translational Control in the Gustatory Cortex Determines the Stability of a Taste Memory
Dr. Kobi Rosenblum
Dept of Neurobiology, University of Haifa
The off-line processing of acquired sensory information in the mammalian cortex is an example for the unique way biology creates to compute and store information which guides behavior. The relatively short temporal phase in the process (i.e. hours following acquisition) is defined biochemically by its sensitivity to protein synthesis inhibitors. Until recently this negative definition of molecular consolidation did not reveal the details of the endogenous processes taking place, minutes to hours, in the neurons and circuit underlying a given memory. We use taste learning paradigms in order to study this process of molecular consolidation in the gustatory cortex.
Recent results, from our laboratory, obtained from genetic, pharmacological, biochemical, electrophysiological and behavioral studies demonstrate that translational control, at the initiation and elongation phases of translation, plays a key role in the process of molecular consolidation. Moreover, this spatially and temporally regulated translation control modifies both general and synaptic protein expression that is crucial for memory stabilization. We propose a model to explain the interplay between regulation of initiation and elongation phases of translation and demonstrate that in certain situations cognitive enhancement can be achieved.
Unravelling signal processing in the cortical column
Lecture
Tuesday, February 24, 2009
Hour: 12:30
Location:
Jacob Ziskind Building
Unravelling signal processing in the cortical column
Idan Segev
Department of Neurobiology &
Interdisciplinary Center for Neural Computation
Hebrew University, Jerusalem
Never before have such intense experimental efforts been focused on neuronal circuits of the size of few hundred thousands neurons whose functions are relatively well defined. The extraordinarily powerful new genetic tools and 3D reconstruction methods, combined with modern multi-electrode arrays, telemetry, two-photon imaging and photo-activation are starting to shed bright light on the intricacies of these circuits, and in particular of the cortical column. But without tools that integrate all this different types of data, one cannot expect to gain a comprehensive understanding on how these circuits perform specific sensory-motor or cognitive functions. As in any other complex system, a modeling study is essential if we are to ever say that we understand how this system works. I will describe several attempts in my group to begin building detailed models of the cortical column, highlighting that, at both circuit level and at the level of individual neurons, models should capture experimental variability and that the building of these models should become automated. I will demonstrate how these models could be used to fruitfully guide new experiments and discuss were all this new integrated "simulation-driven brain research agenda" might lead to.
“Intersectional Optogenetics" unearths neurons that drive fish locomotion
Lecture
Wednesday, February 18, 2009
Hour: 15:00
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
“Intersectional Optogenetics" unearths neurons that drive fish locomotion
Prof. Ehud Isacoff
Dept of Molecular & Cell Biology
UC Berkeley
A major challenge for biology is to develop new ways of determining how proteins operate in complexes in cells. This requires molecularly focused methods for dynamic interrogation and manipulation. An attractive approach is to use light as both input and output to probe molecular machines in cells. While there has been significant progress in optical detection of protein function, little advance has been made in remote control of any kind, including optical methods. As part of our efforts in the NIH Nanomedicine Development Center for the Optical Control of Biological Function, we are developing methods for rapidly switching on and off with light the function of select proteins in cells. The strategies are broadly applicable across protein classes.
Our approach has been to synthesize Photoswitched Tethered Ligands (PTLs), which are attached in a site directed manner to a protein of interest. The site of attachment is designed into the protein to be at a precise distance from a binding site for the ligand. The geometric precision has two important consequences. First, light of two different wavelengths is used to isomerize the linker in such a way that the ligand can only bind in one of the sites, thus making it possible to toggle binding on and off with light. Second, native proteins are not affected by the PTL and remain insensitive to light, since the PTL does not attach. This means that a specific protein in a cell, a tissue and even in an intact freely behaving organism, can have its biochemical signaling turned on and off by remote optical control. The switching is very fast, taking place in ~1 millisecond, i.e. at the rate of the fastest nerve impulse.
I will describe how we used our light-gated kaintate-type glutamate receptor, LiGluR, to study vertebrate locomotion. We used intersectional optogenetics in larval zebrafish to identify a new class of neurons that provide an important modulatory drive to swim behavior.
Computing as modeling
Lecture
Tuesday, February 17, 2009
Hour: 12:30
Location:
Nella and Leon Benoziyo Building for Brain Research
Computing as modeling
Prof. Oron Shagrir
Dept of Philosophy & Dept of Cognitive Science
Hebrew University, Jerusalem
The view that the brain computes is a working hypothesis in cognitive and brain sciences. But what does it mean to say that a system computes? What distinguishes computing systems, such as brains, from non-computing systems, such as stomachs and tornadoes? I argue that a "structural" approach to computing cannot account for much of the computational work in cognitive neuroscience. Instead, I offer a modeling account, which is a variant of a "semantic" approach. On this modeling account, the key feature of computing is a similarity between the "inner" mathematical relations, defined over the representing states, and "outer" mathematical relations, defined over the represented states.
Changes in the brain during chronic nicotine: from thermodynamics to neuroadaptation
Lecture
Tuesday, February 17, 2009
Hour: 10:30
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Changes in the brain during chronic nicotine: from thermodynamics to neuroadaptation
Prof. Henry Lester
California Institute of Technology
The Development of Reading Pathways in School Age Children
Lecture
Thursday, February 12, 2009
Hour: 11:30
Location:
Nella and Leon Benoziyo Building for Brain Research
The Development of Reading Pathways in School Age Children
Dr. Michal Ben-Shachar
English Dept and the Gonda Brain Research Center
Bar Ilan University
Learning to read involves exposure to large amounts of print in a focused period of time during childhood. How does this environmental transition affect cortical circuits for visual perception and shape recognition? I will present data from a developmental study of reading examining the relation between reading skill, cortical function and white matter properties in school age children. Functional properties in area MT+, and white matter properties in temporal callosal fibers, are both correlated with reading skill. I will discuss possible interpretations of these findings within a general model of the reading pathways.
Plasticity in the Human Ventral Stream:: Regional Differences Across Time Scales
Lecture
Monday, February 9, 2009
Hour: 12:30
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Plasticity in the Human Ventral Stream:: Regional Differences Across Time Scales
Prof. Kalanit Grill-Spector
Dept of Psychology & Neurosciences Institute
Stanford University, CA
The human ventral stream consists of regions in the lateral and ventral aspects of the occipital and temporal lobes and is involved in visual recognition. One robust characteristic of selectivity in the adult human ventral stream is category selectivity. Category selectivity is manifested by both a regional preference to particular object categories, such as faces, places and bodyparts, as well as in specific (and reproducible) distributed response patterns across the ventral stream for different object categories. However, it is not well understood how experience modifies these representations and how do these representations come about throughout development. Here, I will describe two sets of experiments in which we addressed these important questions. First, I will describe experiments in adults in which we examined the effect of repetition on categorical responses in the ventral stream. Repeating objects decreases responses in the human ventral stream. However, repetition largely does not change the profile of category selectivity in the ventral stream, except for a place-selective region in the collateral sulcus in which long-lagged repetitions sharpened its responses. Second, I will describe experiments in which we examined changes in category selectivity throughout development from middle childhood (7-11 years), through adolescence (12-16) into adulthood. Surprisingly, we find that it takes more than a decade for the development of adult-like face and place-selective regions. In contrast, the lateral occipital object-selective region showed an adult-like profile by age 7. Finally, I will discuss the implications of these results on plasticity in the ventral stream and our theoretical models linking between fMRI measurements and the underlying neural mechanisms.
Neuronal Circuitry of Conditioned Fear
Lecture
Monday, February 2, 2009
Hour: 12:30
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Neuronal Circuitry of Conditioned Fear
Prof. Andreas Lüthi
Friedrich Miescher Institute, Switzerland
Fearful Brains in an Anxious World
Lecture
Sunday, February 1, 2009
Hour: 15:00
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Fearful Brains in an Anxious World
Prof. Joseph E. Ledoux
Center for Neural Science,
New York University
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