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“Intersectional Optogenetics" unearths neurons that drive fish locomotion
Lecture
Wednesday, February 18, 2009
Hour: 15:00
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
“Intersectional Optogenetics" unearths neurons that drive fish locomotion
Prof. Ehud Isacoff
Dept of Molecular & Cell Biology
UC Berkeley
A major challenge for biology is to develop new ways of determining how proteins operate in complexes in cells. This requires molecularly focused methods for dynamic interrogation and manipulation. An attractive approach is to use light as both input and output to probe molecular machines in cells. While there has been significant progress in optical detection of protein function, little advance has been made in remote control of any kind, including optical methods. As part of our efforts in the NIH Nanomedicine Development Center for the Optical Control of Biological Function, we are developing methods for rapidly switching on and off with light the function of select proteins in cells. The strategies are broadly applicable across protein classes.
Our approach has been to synthesize Photoswitched Tethered Ligands (PTLs), which are attached in a site directed manner to a protein of interest. The site of attachment is designed into the protein to be at a precise distance from a binding site for the ligand. The geometric precision has two important consequences. First, light of two different wavelengths is used to isomerize the linker in such a way that the ligand can only bind in one of the sites, thus making it possible to toggle binding on and off with light. Second, native proteins are not affected by the PTL and remain insensitive to light, since the PTL does not attach. This means that a specific protein in a cell, a tissue and even in an intact freely behaving organism, can have its biochemical signaling turned on and off by remote optical control. The switching is very fast, taking place in ~1 millisecond, i.e. at the rate of the fastest nerve impulse.
I will describe how we used our light-gated kaintate-type glutamate receptor, LiGluR, to study vertebrate locomotion. We used intersectional optogenetics in larval zebrafish to identify a new class of neurons that provide an important modulatory drive to swim behavior.
Computing as modeling
Lecture
Tuesday, February 17, 2009
Hour: 12:30
Location:
Nella and Leon Benoziyo Building for Brain Research
Computing as modeling
Prof. Oron Shagrir
Dept of Philosophy & Dept of Cognitive Science
Hebrew University, Jerusalem
The view that the brain computes is a working hypothesis in cognitive and brain sciences. But what does it mean to say that a system computes? What distinguishes computing systems, such as brains, from non-computing systems, such as stomachs and tornadoes? I argue that a "structural" approach to computing cannot account for much of the computational work in cognitive neuroscience. Instead, I offer a modeling account, which is a variant of a "semantic" approach. On this modeling account, the key feature of computing is a similarity between the "inner" mathematical relations, defined over the representing states, and "outer" mathematical relations, defined over the represented states.
Changes in the brain during chronic nicotine: from thermodynamics to neuroadaptation
Lecture
Tuesday, February 17, 2009
Hour: 10:30
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Changes in the brain during chronic nicotine: from thermodynamics to neuroadaptation
Prof. Henry Lester
California Institute of Technology
The Development of Reading Pathways in School Age Children
Lecture
Thursday, February 12, 2009
Hour: 11:30
Location:
Nella and Leon Benoziyo Building for Brain Research
The Development of Reading Pathways in School Age Children
Dr. Michal Ben-Shachar
English Dept and the Gonda Brain Research Center
Bar Ilan University
Learning to read involves exposure to large amounts of print in a focused period of time during childhood. How does this environmental transition affect cortical circuits for visual perception and shape recognition? I will present data from a developmental study of reading examining the relation between reading skill, cortical function and white matter properties in school age children. Functional properties in area MT+, and white matter properties in temporal callosal fibers, are both correlated with reading skill. I will discuss possible interpretations of these findings within a general model of the reading pathways.
Plasticity in the Human Ventral Stream:: Regional Differences Across Time Scales
Lecture
Monday, February 9, 2009
Hour: 12:30
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Plasticity in the Human Ventral Stream:: Regional Differences Across Time Scales
Prof. Kalanit Grill-Spector
Dept of Psychology & Neurosciences Institute
Stanford University, CA
The human ventral stream consists of regions in the lateral and ventral aspects of the occipital and temporal lobes and is involved in visual recognition. One robust characteristic of selectivity in the adult human ventral stream is category selectivity. Category selectivity is manifested by both a regional preference to particular object categories, such as faces, places and bodyparts, as well as in specific (and reproducible) distributed response patterns across the ventral stream for different object categories. However, it is not well understood how experience modifies these representations and how do these representations come about throughout development. Here, I will describe two sets of experiments in which we addressed these important questions. First, I will describe experiments in adults in which we examined the effect of repetition on categorical responses in the ventral stream. Repeating objects decreases responses in the human ventral stream. However, repetition largely does not change the profile of category selectivity in the ventral stream, except for a place-selective region in the collateral sulcus in which long-lagged repetitions sharpened its responses. Second, I will describe experiments in which we examined changes in category selectivity throughout development from middle childhood (7-11 years), through adolescence (12-16) into adulthood. Surprisingly, we find that it takes more than a decade for the development of adult-like face and place-selective regions. In contrast, the lateral occipital object-selective region showed an adult-like profile by age 7. Finally, I will discuss the implications of these results on plasticity in the ventral stream and our theoretical models linking between fMRI measurements and the underlying neural mechanisms.
Neuronal Circuitry of Conditioned Fear
Lecture
Monday, February 2, 2009
Hour: 12:30
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Neuronal Circuitry of Conditioned Fear
Prof. Andreas Lüthi
Friedrich Miescher Institute, Switzerland
Fearful Brains in an Anxious World
Lecture
Sunday, February 1, 2009
Hour: 15:00
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Fearful Brains in an Anxious World
Prof. Joseph E. Ledoux
Center for Neural Science,
New York University
Generation of temporal patterns in the olivo-cerebellar system
Lecture
Thursday, January 22, 2009
Hour: 12:30
Location:
Jacob Ziskind Building
Generation of temporal patterns in the olivo-cerebellar system
Dr. Gilad Jacobson
Dept of Neurobiology
Hebrew University, Jerusalem
The olivo-cerebellar system plays a crucial role in timing of both motor and non-motor tasks. The mechanisms underlying this timing capability are still unclear. Here I propose a plausible mechanism in which a temporal pattern reflects accurate phase relationships between the oscillatory activity of olivary neurons. I provide evidence from chronic multi-electrode recordings in awake rats that inferior olive oscillations possess hitherto unknown properties that: (1) Oscillations in different parts of the inferior olive can maintain constant, non-zero phase differences; (2) The oscillation frequency of olivary neurons is co-modulated; and (3) Phase differences are well maintained despite frequency changes. Thus, the inferior olive can generate not only “clock ticks” at the oscillation cycle duration, but more importantly shorter intervals that emerge by combining different parts of the olivary circuitry. This enables the olivo-cerebellar circuit to support timing in the range implicated by behavioural studies.
Personal theories and self-images: Critical tools in the rehabilitation from a severe brain injury
Lecture
Sunday, January 18, 2009
Hour: 14:45
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Personal theories and self-images: Critical tools in the rehabilitation from a severe brain injury
Prof. Yoram Eshet
Dept of Psychology & Education
The Open University of Israel
The lecture is given by a person who suffers from a severe (right-parietal) brain injury from the Yom Kippur War (1973). It discusses the injury as it is perceived by the injured person. The lecture focuses on self-images of the injury and emphasizes the pivotal role of higher cognitive processes, such as personal theories and narratives, as critical tools for a successful; rehabilitation.
Learning to smell: Cortical plasticity and odor perception
Lecture
Wednesday, January 14, 2009
Hour: 10:30
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Learning to smell: Cortical plasticity and odor perception
Prof. Donald Wilson
New York University School of Medicine
& Emotional Brain Institute
Nathan Kline Institute for Psychiatric Research
Odor perception - discrimination and recognition of volatile chemicals in the environment – is critical for wide ranging behaviors including kin recognition, mate selection, predator avoidance, homing, and feeding. Most naturally occurring odors are complex mixtures, often containing hundreds of different components. Furthermore, natural odors invariably occur against odorous backgrounds. Thus, olfaction and odor perception involves far more than simple odor ligands binding to receptors in the nose. I will describe recent work
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Salience-based selection: How does the brain ignore saliency?
Lecture
Tuesday, December 23, 2008
Hour: 12:30
Location:
Jacob Ziskind Building
Salience-based selection: How does the brain ignore saliency?
Dr. Carmel Mevorach
Behavioral Brain Sciences Centre
University of Birmingham UK
At any particular time the brain is bombarded with an almost infinite amount of visual information. Efficient behaviour, then, relies on a process of attentional selection which is required to filter out irrelevant stimuli and to prioritize the processing of relevant events. Importantly, this attentional prioritisation process needs to be flexible in order to be responsive to changes in behavioural relevance. Thus, bottom-up cues for attention must be modulated by top-down information, reflecting the goals of behaviour. In recent years, considerable neurobiological evidence has accumulated indicating that flexible visual selection is controlled by a fronto-parietal network within the brain. In particular, the posterior parietal cortex (PPC) has been implicated both when spatial selection is required and when selection is non-spatial. In a series of recent studies we have used converging operations to demonstrate a link between the PPC and a form of non-spatial selection – selecting on the basis of the relative salience of the stimuli. Using variants of the classic Global/Local task we orthogonally manipulated the level of shape that participants responded to and the salience of that information. Using experimental techniques such as neuropsychological studies, Trans-cranial Stimulation (TMS) and functional imaging (fMRI) we show that the PPC is sensitive to the relative saliency of the information so that selection can be based on whether the target or the distractor are more salient. Most importantly, we provide evidence for distinct roles played by the right and left PPC in selection and suppression of saliency, respectively. The data may also suggest how such complementary forms of selection are implemented in the brain.
Representation of the visual field in object-selective cortex
Lecture
Wednesday, December 17, 2008
Hour: 15:00
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Representation of the visual field in object-selective cortex
Dr. Rory Sayres
Dept of Psychology, Stanford University
Functional MRI (fMRI) studies have defined a series of visual processing regions in the human cortex, which are believed to enable visual recognition behaviors through a hierarchy of processing stages. At the higher stages in this hierarchy lie regions which preferentially respond to images of intact objects compared to other visual stimuli, a set of regions collectively termed object-selective cortex. Within object-selective cortex exist category-selective regions, which prefer particular categories of images over others (e.g., faces, body parts, houses or scenes). Initially these regions were considered non-retinotopic, but increasing evidence indicates substantial retinal position selectivity, and in some cases retinotopy, in these regions.
What is the representation of the visual field in object-selective regions? Are separate object- and category-selective regions part of a single map or embedded within a set of distinct visual field maps? We scanned seven subjects on separate experiments to localize object/category-selective regions, and measure visual field maps (GE 3T scanner). For retinotopic experiments, subjects viewed moving bar stimuli containing different stimuli, including slowly drifting checkerboards and frontal face images. The bars extended out to around 14° eccentricity from the fovea, and had a width of ~2.6°. We employed a recently-developed method for estimating population receptive fields
(pRFs) using fMRI (Dumoulin and Wandell, Neuroimage, 2008), which estimates pRF center and size for each cortical location.
Face-containing bars produced substantially larger responses than checkerboards along the fusiform gyrus, improving our ability to measure visual field maps in these regions. Eccentricity maps revealed two foveal representations, which may correspond to visual field map clusters previously identified as VO and VT (Wandell et al., Neuro-opth. Jpn., 2006). These foveas are within or adjacent to fusiform face-selective regions, and separated by smoothly-varying extra-foveal maps which are less face-selective. For several subjects, pRF sizes systematically increased with eccentricity in face-selective regions. The distribution of pRF sizes were substantially larger than in earlier visual cortex, but comparable to recent measurements made in lateral occipital cortex.
We find two spatially separate face-selective regions along the fusiform gyrus, with comparable visual field coverage, separated by a representation of intermediate eccentricities. This indicates these two regions are likely to fall within different visual field maps. Current work addresses possible effects of low-level visual features (e.g. spatial frequency) and stimulus visibility in driving the observed face-selective retinotopic responses. I will also present some preliminary data from retinotopic mapping with house-containing bars, and an examination of retinotopic organization in house- or scene-selective cortical regions.
Active sensing: from natural stimulus statistics to auditory object classification in echolocating bats
Lecture
Tuesday, December 16, 2008
Hour: 12:30
Location:
Jacob Ziskind Building
Active sensing: from natural stimulus statistics to auditory object classification in echolocating bats
Yossi Yovel
(Post-doc Ulanovsky Group)
Department of Neurobiology, WIS
Echolocating bats perceive their surroundings acoustically. They continuously emit sonar signals and analyze the returning echoes, which enables them to orient in space and acquire food in complete darkness. Natural echoes along with other natural sounds compose a major part of the bat's sensory world, and have likely played a key evolutionary role in shaping the design of the bat's echolocation system and the auditory computations in the bat brain. However, the statistics of natural complex echoes, as well as how bats utilize them, are poorly understood – especially in the context of sonar-based object classification. The goal of this work was to elucidate the natural acoustical stimuli in the bat's world. I will present data on the statistical properties of complex echoes from various classes of plants and will compare them to what is known about natural images. In addition I will use a machine learning approach to discuss ways that bats may use to classify these stimuli. Finally, I will also describe behavioral experiments that aimed to understand the strategy used by bats to classify natural stimuli.
Optogenetics: Application to Neuroscience and Neuropsychiatry
Lecture
Monday, December 15, 2008
Hour: 11:00
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Optogenetics: Application to Neuroscience and Neuropsychiatry
Prof. Karl Deisseroth
Depts of Bioengineering & Psychiatry, Stanford University
Optogenetics, synthesizing microbial opsins and solid-state optics, has achieved the goal of millisecond-precision bidirectional control of defined cell types in freely behaving mammals, but has not yet been widely applied to neuroscience and neuropsychiatry experimental challenges. First, relevant to important basic science questions, we have now successfully developed methods to target and control several classes of modulatory neurons in behaving mammals and intact neural tissue, and we are probing and quantifying measures of altered circuit performance under optogenetic control of defined circuit elements to address longstanding questions about neural circuit dynamics. Second, relevant to neuropsychiatric disease questions, we have used this approach for depth targeting of hypothalamic cells (in this case, the hypocretin/orexin cells in the lateral hypothalamus), establishing for the first time a causal relationship between frequency-dependent activity of genetically defined neurons important in clinical neuropsychiatric disease and a complex orchestrated mammalian behavior. We also are now applying fast optical control and optical imaging to animal models of depression, Parkinson’s Disease, and altered social behavior relevant to autism. Insights into both normal circuit function and disease mechanisms are beginning to emerge from this multidisciplinary technological approach.
Prof. Deisseroth is hosted by the students of the Department of Neurobiology, as a part of the departmental students-invited visiting scientist program.
Optogenetics:Technology Development
Lecture
Sunday, December 14, 2008
Hour: 14:30
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
Optogenetics:Technology Development
Prof. Karl Deisseroth
Depts of Bioengineering& Psychiatry, Stanford University
In 1979, Francis Crick delineated the major challenges facing neuroscience and called for a technology by which all neurons of just one type could be controlled, “leaving the others more or less unaltered”. A new set of technologies now called optogenetics, synthesizing microbial opsins and solid-state optics, has achieved the goal of millisecond-precision bidirectional control of defined cell types in freely behaving mammals. ChR2 was the first microbial opsin brought to neurobiology, where we initially found that ChR2-expressing neurons can fire blue light-triggered action potentials with millisecond precision, as a result of depolarizing cation flux, without addition of chemical cofactors; this approach has since proven versatile across a variety of preparations. Second, in work stimulated by the finding that the all-trans retinal chromophore required by microbial opsins appears already present within mammalian brains, so that no chemical cofactor need be supplied, we found that neurons targeted to express the light-activated chloride pump halorhodopsin from Natronomonas pharaonis (NpHR) can be hyperpolarized and inhibited from firing action potentials when exposed to yellow light in intact tissue and behaving animals; because of the excitation wavelength difference, the two optical gates can be simultaneously used in the same cells even in vivo5. Third, we employed genomic strategies to discover and adapt for neuroscience a third major optogenetic tool, namely a cation channel (VChR1) with action spectrum significantly redshifted relative to ChR2, to allow tests of the combinatorial interaction of cell types in circuit computation or behavior. Fourth, we have developed genetic targeting tools for versatile use of microbial opsins with existing resources including cell type-specific promoter fragments or Cre-LoxP mouse driver lines suitable for a wide variety of neuroscience investigations. Finally, we have developed integrated fiberoptic and solid-state optical approaches to provide the complementary technology to allow specific cell types, even deep within the brain, to be controlled in freely behaving mammals.
Prof. Deisseroth is hosted by the students of the Department of Neurobiology, as a part of the departmental students-invited visiting scientist program.
As Our Brain Is, So We Are
Lecture
Monday, December 1, 2008
Hour: 12:15
Location:
Arthur and Rochelle Belfer Building for Biomedical Research
As Our Brain Is, So We Are
Prof. Fred Travis
Center for Brain, Consciousness, and Cognition
Maharishi University of Management, Fairfield, IA
Brain functioning underlies perception of outer objects and supports behavioral responses to environmental challenges. As brain circuits mature in the first 20 years of life, so mental abilities emerge. This talk will examine the relation between brain maturation—synaptogenesis and myelination— and levels of cognitive, moral, and ego development. Learning disabilities, such as ADHD and reading disabilities will be explored in light of associated brain patterns. Effects of experiences on brain functioning will also be examined including effects of restrictive experiences such as stress, drug use and fatigue, and enhancing experiences, such as Transcendental Meditation practice. High levels of human potential will be discussed in terms of enhanced brain functioning.
Role of dopamine systems in addiction
Lecture
Wednesday, November 26, 2008
Hour: 12:00
Location:
Nella and Leon Benoziyo Building for Brain Research
Role of dopamine systems in addiction
Prof. Marco Diana
Laboratory of Cognitive Neuroscience
Dept of Drug Sciences, University of Sassari, Italy
Dopamine neurons of the VTA, that project to the Nucleus Accumbens, have been involved in the initial rewarding properties of addicting compounds and, more appropriately, in the long-lasting changes observed after chronic drug administration and subsequent withdrawal. Indeed, alcohol, opiates cannabinoids and other substances provoke, upon withdrawal, a drastic and marked reduction of dopaminergic tone. In addition, aversive, non drug-related stimuli also reduce dopaminergic physiological tone. Furthermore, recent human studies reported an attenuated response to methylphenidate in alcoholic subjects and a lower (than controls) dopaminergic tone. These changes are paralleled by a lower number of D2 receptors and suggest a general “impoverishment” of dopamine transmission in the addicted brain. Accordingly, a dopamine deficit correlated with alcohol craving, which was associated with a high relapse risk. Similar results were reported for nicotine withdrawn rats.
This hypodopaminergic state could be the target of therapies aimed at restoring the deficient dopamine transmission observed after chronic drug administration in preclinical and clinical investigations.
Interaction between the amygdala and the prefrontal cortex in emotional memory
Lecture
Tuesday, November 25, 2008
Hour: 12:30
Location:
Jacob Ziskind Building
Interaction between the amygdala and the prefrontal cortex in emotional memory
Dr. Mouna Maroun
Department of Neurobiology and Ethology
University of Haifa
The amygdala and the medial prefrontal cortex interact to guide emotional behavior. Alterations in the balance between these two structures can lead to persistent fear associations and to the development of anxiety disorders.
In this talk I will present work from my laboratory studying the interaction between these two structures in normal conditions and when exposed to a fearful or stressful experience.
We have recently found that fear and extinction learning induce differential changes in these two structures that could hint on the mechanisms by which these structures encode memories of fear and safety.
ON THE RELATIONSHIP BETWEEN MOTOR AND PERCEPTUAL BEHAVIOR –
Lecture
Wednesday, November 12, 2008
Hour: 12:00
Location:
Nella and Leon Benoziyo Building for Brain Research
ON THE RELATIONSHIP BETWEEN MOTOR AND PERCEPTUAL BEHAVIOR –
Dr. Andrei Gorea
Laboratoire Psychologie de la Perception
CNRS & Paris Descartes University
Starting with Goodale & Milner's (1992) neuropsychological observations, a large number of neuropsychological and psychophysical studies has documented a putative dissociation between perception and action. However, a closer inspection of this literature reveals a number of methodological and conceptual shortcomings. I shall present a series of experiments making use of a variety of psychophysical techniques designed to gauge the relationship between Response Times as well Saccade Perturbations and observers' Perceptual States as assessed for not-masked and masked (metacontrast) stimuli via Yes/No, Temporal Order Judgments and Anticipation Response Times paradigms. All these studies reveal a strong action-perceptual state correlation indicating that motor and perceptual responses are based on a unique internal response. A one-path-two-decisions stochastic race model drawing on standard Signal Detection Theory provides a fair account of some of these data, hence overruling the necessity of a two-paths model of visual processing.
New insights into the hallmarks of obsessive-compulsive disorder (OCD): The prevalence of incompleteness and pessimal behavior
Lecture
Tuesday, November 11, 2008
Hour: 12:15
Location:
Jacob Ziskind Building
New insights into the hallmarks of obsessive-compulsive disorder (OCD): The prevalence of incompleteness and pessimal behavior
Prof. David Eilam
Dept of Zoology, Tel Aviv University
Performance of OCD patients was compared with that of matched normal individuals who were asked to perform the same task that the patients ascribed to their performance. Sequences of consecutive functional acts were long in controls and short in OCD, whereas sequences of non-functional acts were short in controls and long in OCD. Non-functional acts accumulated as a "tail" after the natural termination of the task, supporting the notion of incompleteness as an underling mechanism in OCD. It is suggested that the identified properties are consistent with a recent hypothesis that the individual's attention in OCD shifts from a normal focus on structured actions to a pathological attraction onto the processing of basic acts, a shift that invariably overtaxes memory. Such characteristics and mechanisms of compulsive rituals may prove useful in objective assessment of psychiatric disorders, behavioral therapy, and OCD nosology.
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