Other/Models

Title Data Meta data Cell types Summary Disease Technology #samples #cells Meta programs CNAs UMAP Cell cycle
Aynaud et al. 2020 Cell types Summary Ewing sarcoma 10x, Fluidigm C1 14 16337 UMAP Cell cycle
Cui et al. 2021 Cell types Summary Pituitary neuroendocrine tumors STRT seq 23 2679 Meta programs UMAP Cell cycle
Dost et al. 2020 Cell types Summary Lung cancer 10x 10 32661 Meta programs CNAs UMAP Cell cycle
Durante et al. 2020 Summary Uveal melanoma 10x 11 103703
Ebinger et al. 2016 Cell types Summary ALL SMARTer 5 185 UMAP Cell cycle
Franses et al. 2017 Cell types Summary IPMN/PDAC 3 34 UMAP
Franses et al. 2020 Cell types Summary PDAC 10x 4 81 UMAP Cell cycle
Gonzalez et al. 2022 Cell types Summary Brain metastases 10x 15 99150 Meta programs CNAs UMAP Cell cycle
Gubin et al. 2018 Cell types Summary Sarcoma 10x 4 14618 UMAP
Hollern et al. 2019 Cell types Summary TNBC 10x 4 27532 Meta programs UMAP
Jansky et al. 2021 Cell types Summary Neuroblastoma MARS-seq 4 4028 UMAP Cell cycle
Jordan et al. 2016 Cell types Summary Breast cancer 16 74 UMAP Cell cycle
Kinker et al. 2020 Summary CCLE collection 10x 198 53513 Cell cycle
Kumar et al. 2022 Cell types Gastric cancer 10x 40 158500 Meta programs UMAP Cell cycle
Ligorio et al. 2019 Cell types Summary PDAC SMARTer 4 93 UMAP Cell cycle
Massalha et al. 2020 Cell types Summary Liver metastases (CRC, Cholangiocarcinoma) 10x 5 1354 UMAP Cell cycle
Mercatelli et al. 2021 Cell types Summary Neuroblastoma 10x 2 2067 UMAP Cell cycle
Miyamoto et al. 2015 Cell types Summary Prostate cancer 26 169 UMAP Cell cycle
Raghavan et al. 2021 Cell types Summary PDAC Seq-Well 53 41663 Meta programs UMAP Cell cycle
Sun et al. 2021 Cell types Summary HCC CTCs SmartSeq2 10 113 UMAP Cell cycle
Yao et al. 2020 Cell types Summary ESCC 10x 6 35847 Meta programs UMAP
Yu et al. 2012 Summary PDAC EpCAM or IgG CTC-Chip 2 32
Zhang et al. 2019 Cell types Gastric cancer 10x 13 56440 Meta programs CNAs UMAP Cell cycle
All Other/Models   472 650873